Not that hard to think of, here are a few thoughts:
Lethal neurotoxin- upgrade the neurotoxin of watchers and huntresses so that it instantly kill the targeted organic unit after a certain time upon hitting. (about 10-15 seconds)
Give ranged units a possibility of "headshot", deals massive dmg to AMPed units and instantly kills organic units. To balance it add the possibility of missing, just like bullets.
Break aircraft- Ikrans Maktos deals 10% of the aircraft's max hp, breaking it. Prevents any attack until fixed. (Just like AMPs)
When you become a warlord, you may be able to train subordinate warriors that can gain exp and learn skills. They can lead the battle for the avatar marine, there should be a cap, 1 or 2 sounds good.
You still need to add Toruk's wing pushback, Thanators' jump strike, Titanos' "stampede?" and a skill for viperwolves, possibly a group aura which they become stronger when more wolves are nearby.
That's it for now, going to sleep.
Off topic: wierd glitches:
Hell Trucks can deliver unobs to unfinished space-pads.
Berthas takes waaayyy too long to unload if you click the wrong place.
Hotkey interference of organic units' special move autocast (E) and Ekin somersalt (E)